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@recursionpharma Recursion

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    36 repositories

    • nesso

      Public
      Accelerating Open-Source Binding Affinity Predictions
      Python
      •
      Apache License 2.0
      •1•26•0•0•Updated Jul 20, 2026Jul 20, 2026

    • gflownet

      Public
      GFlowNet library specialized for graph & molecular data
      deep-learningpytorchgraph-neural-network
      deep-learningpytorchgraph-neural-networkgflownet
      Python
      •
      MIT License
      •54•291•14•10•Updated May 21, 2026May 21, 2026

    • opentxfm

      Public
      Effective Biological Representation Learning by Masking Gene Expression
      0•2•0•0•Updated Apr 7, 2026Apr 7, 2026

    • EFAAR_benchmarking

      Public
      External repo for the EFAAR benchmarking paper
      Jupyter Notebook
      •
      Apache License 2.0
      •6•25•0•10•Updated Mar 24, 2026Mar 24, 2026

    • boltz

      Public
      Official repository for the Boltz biomolecular interaction models
      Python
      •
      MIT License
      •860•2•0•0•Updated Jul 28, 2025Jul 28, 2025

    • synflownet-boltz

      Public
      Python
      •
      MIT License
      •12•67•1•1•Updated Jun 27, 2025Jun 27, 2025

    • academic-keyword-occurrence

      Public
      Extracts the historic word occurrence of a search term in academic papers
      Python
      •
      MIT License
      •89•0•0•0•Updated Jun 6, 2025Jun 6, 2025

    • rxrx1-utils

      Public
      Starter code for the CellSignal NeurIPS 2019 competition.
      Jupyter Notebook
      •
      Apache License 2.0
      •26•45•2•1•Updated Jun 6, 2025Jun 6, 2025

    • stackstorm_pack_ansible

      Public archive
      st2 content pack containing ansible integrations
      Python
      •
      Apache License 2.0
      •30•0•0•0•Updated Jun 6, 2025Jun 6, 2025

    • SpiffWorkflow

      Public
      A powerful workflow engine implemented in pure Python
      Python
      •
      GNU Lesser General Public License v3.0
      •339•0•0•0•Updated Jun 6, 2025Jun 6, 2025

    • rxrx-datasets

      Public
      READMEs for RxRx.ai datasets
      2•29•3•1•Updated Jun 6, 2025Jun 6, 2025

    • deps-deploy

      Public
      deploy your stuff
      Clojure
      •
      Eclipse Public License 1.0
      •35•0•0•0•Updated Jun 6, 2025Jun 6, 2025

    • proxbias

      Public
      External repo to accompany Proximity Bias paper
      Jupyter Notebook
      •
      Apache License 2.0
      •1•5•0•0•Updated Jun 6, 2025Jun 6, 2025

    • logrus-stack

      Public archive
      Adds stack trace to Sirupsen/logrus
      Go
      •
      MIT License
      •21•0•0•0•Updated Jun 6, 2025Jun 6, 2025

    • mole_public

      Public
      Recursion's molecular foundation model
      Python
      •
      Other
      •16•68•4•0•Updated Jun 6, 2025Jun 6, 2025

    • it-glean-2024-testing-public

      Public
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 6, 2025Jun 6, 2025

    • maes_microscopy

      Public
      Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.
      computer-visiondeep-learningbiology
      computer-visiondeep-learningbiologymicroscopyphenomicsmasked-autoencodergenerative-ai
      Jupyter Notebook
      •
      Other
      •16•78•5•5•Updated Jun 6, 2025Jun 6, 2025

    • go-testutils

      Public archive
      Golang helpers for testing
      Go
      •0•1•0•0•Updated Jun 6, 2025Jun 6, 2025

    • go-dbutil

      Public
      Golang utilities for interacting with databases
      Go
      •
      MIT License
      •0•1•0•0•Updated Jun 6, 2025Jun 6, 2025

    • bc_jupyter

      Public template
      Jupyter Interative App for BioHive Portal (Open OnDemand)
      HTML
      •0•0•0•0•Updated Jun 5, 2025Jun 5, 2025

    • bc_desktop

      Public
      Desktop Interative App for BioHive Portal (Open OnDemand)
      Shell
      •
      MIT License
      •0•0•0•0•Updated Jun 5, 2025Jun 5, 2025

    • bc_code

      Public
      Code Server Interactive App for BioHive Portal (Open OnDemand)
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 5, 2025Jun 5, 2025

    • airflow-gke-taskflow

      Public archive
      An Apache Airflow plugin that enables the Taskflow API for Google Kubernetes Engine (GKE)
      Python
      •
      Apache License 2.0
      •0•0•0•8•Updated Jun 5, 2025Jun 5, 2025

    • perp

      Public archive
      A Repository for housing a Python resolver benchmark
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•1•1•Updated Jul 6, 2023Jul 6, 2023

    • perp_public_benchmarks

      Public archive
      Public Benchmarks Used For Evaluating Python Environment Resolvers using perp
      BSD 3-Clause "New" or "Revised" License
      •0•0•2•0•Updated Feb 19, 2022Feb 19, 2022

    • cellxgene-gateway

      Public archive
      Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple d…
      Python
      •
      Apache License 2.0
      •41•0•0•0•Updated Apr 30, 2021Apr 30, 2021

    • cellxgene

      Public archive
      An interactive explorer for single-cell transcriptomics data
      Python
      •
      MIT License
      •154•1•0•0•Updated Apr 29, 2021Apr 29, 2021

    • knowledge-repo-package

      Public archive
      A next-generation curated knowledge sharing platform for data scientists and other technical professions.
      Python
      •
      Apache License 2.0
      •683•0•0•0•Updated Feb 22, 2021Feb 22, 2021

    • terraform-google-jx-vpc

      Public archive
      A Terraform module for creating Jenkins X infrastructure on Google Cloud
      HCL
      •
      Apache License 2.0
      •95•0•0•0•Updated Sep 29, 2020Sep 29, 2020

    • anonymous-slack

      Public archive
      A Heroku service that lets you send anonymous messages to colleagues on Slack.
      Go
      •21•20•1•0•Updated Jun 19, 2020Jun 19, 2020
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