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@NCICCGPO

Center for Cancer Genomics Programs Office, CCG/NCI

Code repositories for CCGPO Analysis Working Groups

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  1. gdan-tmp-models gdan-tmp-models Public

    Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.

    Python 37 6

  2. scATAC-Manuscript scATAC-Manuscript Public

    Jupyter Notebook 16 2

  3. HiChIP-Manuscript HiChIP-Manuscript Public

    R 14 2

  4. CTD2-Network CTD2-Network Public

    Cancer Target Discovery & Development (CTD²) Network Computational Tools

    R 2 1

  5. Tumor-Deconvolution-and-Immunogenicity-Manuscript Tumor-Deconvolution-and-Immunogenicity-Manuscript Public

    R 2

  6. HCMI-Flagship-Manuscript HCMI-Flagship-Manuscript Public

    This repository collects pipelines, codes, and intermediate files/results for the HCMI flagship study.

    HTML 1

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