🗂 Master issue — VCell Zenodo release archiving · on the VCell board.
Why — Every important VCell-family release should have a stable, citable DOI with correct attribution, so papers and reuse can point at an exact version. Historically releases weren't archived consistently, and some landed under fragmented concepts with mismatched authors.
What — Reproducibly archive VCell-family releases to Zenodo with correct titles, version lineage (continues across versions), and curated per-era author lists (contributors reflected accurately, PI credited last). Backfill the history, keep new releases archived going forward.
Scope — vcell, pyvcell, vcell-solvers, cam-center/SpringSaLaD.
How — driven by the shared zenodo-maint tool (reusable GitHub Actions: archive-on-release + drift monitor) rather than the fragile native Zenodo↔GitHub webhook; author lists come from a curated authorship pipeline.
Status
- ✅ Historical releases backfilled;
vcell-solvers onboarded (native webhook disabled).
- 🔲 SpringSaLaD author-list correction — pending PI sign-off, targeted 2026-07-07.
Per-repo archiving PRs (evidence)
Coordination inbox: comment with progress/handoffs (what moved + PR/commit links); the lead posts a periodic status summary.
🗂 Master issue — VCell Zenodo release archiving · on the VCell board.
Why — Every important VCell-family release should have a stable, citable DOI with correct attribution, so papers and reuse can point at an exact version. Historically releases weren't archived consistently, and some landed under fragmented concepts with mismatched authors.
What — Reproducibly archive VCell-family releases to Zenodo with correct titles, version lineage (
continuesacross versions), and curated per-era author lists (contributors reflected accurately, PI credited last). Backfill the history, keep new releases archived going forward.Scope —
vcell,pyvcell,vcell-solvers,cam-center/SpringSaLaD.How — driven by the shared
zenodo-mainttool (reusable GitHub Actions: archive-on-release + drift monitor) rather than the fragile native Zenodo↔GitHub webhook; author lists come from a curated authorship pipeline.Status
vcell-solversonboarded (native webhook disabled).Per-repo archiving PRs (evidence)
vcell— going-forward archiving: CITATION.cff +.zenodo.json+ workflows (Add Zenodo going-forward archiving (CITATION.cff, .zenodo.json, workflows) #1716); license fixcc-by-4.0 → MIT(Fix .zenodo.json license: cc-by-4.0 → mit #1717)pyvcell— release archiving (Add Zenodo release archiving (concept zenodo.21127437) pyvcell#55); title casingpyvcell → pyVCell(Fix title casing: pyvcell → pyVCell pyvcell#56)vcell-solvers— onboarded to reproducible archiving (chore(zenodo): onboard vcell-solvers to reproducible Zenodo archiving vcell-solvers#35)cam-center/SpringSaLaD— release archiving + MIT license (Add Zenodo release archiving + MIT license (concept zenodo.11270119) cam-center/SpringSaLaD#11)Coordination inbox: comment with progress/handoffs (what moved + PR/commit links); the lead posts a periodic status summary.