Find a way for users to avoid SQL configurations

[d33bs]

Hi Dave! I've been trying this out on a new dataset. Thanks for putting this together, it's a great start. However, I see that the preset hard-codes compartments (cells, nuclei, cytoplasm) and failed when I ran it on my current dataset which has only Cells and Nuclei objects. For biologists to adopt using cytotable, we do need to be able to use it without writing any SQL. Can this be modified such that I can pass in the compartments I have? I see from documentation that custom compartments are supported elsewhere in Cytotable.

Originally posted by @kate-bowers-broad in #426 (comment)

[d33bs]

Example data:

Thanks so much, Dave! That sounds great. Here's a link to the analysis files from one plate in the batch I was working on, on the Cell Painting Gallery: https://open.quiltdata.com/b/cellpainting-gallery/tree/cpg0037-oasis/xellar/workspace/analysis/2026_03_03_Batch2/OASIS--20Xvs40X--20x-Dev69_40723/analysis/

Thanks again for your help!