Issues

• Archive repository

  Duke-GCB/bespin-cwl#80 · Filter by author dleehr opened on Apr 2, 2019
  

• exome-seq: allow variant recalibration to fail

  Duke-GCB/bespin-cwl#73 · Filter by author dleehr opened on Feb 8, 2019

• Replace python helper scripts with bespin-cli calls

  Duke-GCB/bespin-cwl#69 · Filter by author dleehr opened on Jan 14, 2019

• Specify file formats

  Duke-GCB/bespin-cwl#66 · Filter by author dleehr opened on Oct 29, 2018

• Clarify the workflows section in CircleCI config

  Duke-GCB/bespin-cwl#64 · Filter by author dleehr opened on Oct 24, 2018

• Restructure packed workflows and versioning

  Duke-GCB/bespin-cwl#62 · Filter by author dleehr opened on Oct 17, 2018
  3

  

• trim_galore: outputs no trimmed files when paired=false

  Duke-GCB/bespin-cwl#49 · Filter by author dleehr opened on Jan 31, 2018

• exomeseq-methods: use author year reference indicators

  Duke-GCB/bespin-cwl#36 · Filter by author johnbradley opened on Oct 2, 2017
  2

• exome-seq: include checksums and source url for bespin sample input files

  Duke-GCB/bespin-cwl#35 · Filter by author johnbradley opened on Sep 29, 2017

• exomeseq-methods: File naming and formatting

  Duke-GCB/bespin-cwl#33 · Filter by author dleehr opened on Sep 26, 2017

• exome-seq: Include SoftwareRequirements

  Duke-GCB/bespin-cwl#31 · Filter by author dleehr opened on Sep 15, 2017

• exome-seq: break workflow into steps

  Duke-GCB/bespin-cwl#17 · Filter by author dleehr opened on Aug 16, 2017

• Provide additional samples for joint genotyping

  Duke-GCB/bespin-cwl#5 · Filter by author dleehr opened on May 23, 2017 · exome-seq